Pre-Order & In Stock Checkout

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Hey everyone, I've been searching for solutions to apply to my store's checkout. With Pre Orders, my customers have the ability to make an order but not get charged upfront. They would typically get charged once the item has been shipped. I am using Bold Subscriptions for this. The problem I am facing is that my customers cannot add multiple pre order products to a cart before being redirected to Bold's checkout and if I were to use the native checkout, Shopify treats the Pre Order items as an "In Stock" item and charges the customer upfront. 


I am seeking a solution that would allow a checkout for both Pre Order and In Stock items, and only charge the customer for the In Stock items while allowing me to charge the customer for Pre Orders (manually) once the item has shipped.


Does anyone have any recommendations for a solution that could potentially solve this use case?


Thanks in advance