Shopify Analytics doesn't record visitors

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Hi there
Shopify is no longer picking up visitors on their analytics. I got no idea what's blocking it though. Their CDN is loaded in with the trekkie code and everything.
When i use an older theme (from 20 days ago) it works again. But how will i ever find the bit of code that's conflicting with their tracking code?
I got the Content for header code in there as always.
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