How to avoid app conflicts with multi-origin shipping setup?

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We are in the process of setting up a pop up that will show in store availability at 3 of our store locations. We have come across the following documentation:

https://help.shopify.com/en/manual/shipping/setting-up-and-managing-your-shipping/local-methods/loca...

https://help.shopify.com/en/manual/shipping/setting-up-and-managing-your-shipping/convert-to-shippin...

It mentions that by turning these on, there may be a conflict with apps that we use. We of course do not want this to happen and the question is what apps could this conflict with and how do we determine if it could cause an issue before turning it on.

Thanks,

James