FedEx carrier-calculated rates in Shopify broken after reconnect request (worked before)

Hi everyone,

I’m having an issue with FedEx carrier-calculated shipping rates in Shopify and hoping someone here has seen this before.

We’re based in Spain and have been using Shopify’s native FedEx integration (no third-party apps) to show our negotiated rates at checkout. It worked perfectly for months.

Today, Shopify emailed us saying we need to reconnect our FedEx account due to a scheduled update.

When I try to reconnect from:
Settings → Shipping and delivery → Carrier accounts → Reconnect FedEx

Shopify redirects me to FedEx. All steps validate correctly, but at the final confirmation step I always get:

“The system has experienced an unexpected problem. Please try again later.”

So the connection never completes.

Important points:

  • Not a credentials issue

  • FedEx → Shopify (labels/shipments) still works

  • Only Shopify → FedEx (rates at checkout) is broken

  • This setup worked until today

Has anyone in the EU dealt with this recently?
Did you manage to fix it without switching to third-party apps?

Any advice appreciated.

Yes, that’s exactly what we’re experiencing.

Labels still work via FedEx Ship Manager, but as soon as we try to reconnect FedEx inside Shopify to restore carrier-calculated rates, we get the “unexpected problem” error during Security Verification.

It really feels like an OAuth / API handshake issue on Shopify’s side rather than a credentials problem, especially since:

  • We generated a brand new Production Meter via the FedEx Developer Portal

  • FedEx confirmed the meter is active

  • The Rate API module has been enabled on their side

We’ve already tried:

  • Removing the FedEx account completely (not just reconnecting)

  • Clearing cache and cookies

  • Testing in incognito

  • Re-checking Web Services + negotiated rates

  • Re-saving shipping zones before reconnect

Still the same error.

At this point, I’m leaning toward asking Shopify to manually reset the carrier integration on the backend. From what you’re saying, that seems to be the real fix for EU stores after the recent reconnection update.

Really appreciate you sharing this — it confirms we’re probably chasing the wrong side.

We are getting the exact error after being redirected to the Fedex security verification pop-up:

Here is the message that I just received from the Support

US Seller here, having the same issue. Have you had any luck so far?

No, nothing…

Here is the message that I just received from FedEx: