Hey, I came up with a workaround that puts these orders down for good. I also wish Shopify would just fix it, but since they haven’t…
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Reopen the order
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Add a new custom item to the order. Call it “Mark as fulfilled” or whatever you want.
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Put the cost of the item as $0 and make sure you’ve unchecked the box that says “send update to customer”
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Fulfill this new, $0 item
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Archive the order
This will take the order out of the notifications bubble and make it grey. Hooray!